Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 AL022069.1-201ENST00000568025 1636 ntBASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF103-CHMP3A0A140T963 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF103-CHMP3A0A140T963 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF103-CHMP3A0A140T963 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
RNF103-CHMP3A0A140T963 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 TSPY13P-201ENST00000338964 914 ntBASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF103-CHMP3A0A140T963 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF103-CHMP3A0A140T963 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC074183.2-201ENST00000623112 922 ntBASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 C1orf229-201ENST00000623686 2258 ntBASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF103-CHMP3A0A140T963 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC120024.1-201ENST00000562672 995 ntBASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC131274.2-201ENST00000580697 1507 ntBASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF103-CHMP3A0A140T963 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF103-CHMP3A0A140T963 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms