Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-9A0A0J9YWB2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRBV7-9A0A0J9YWB2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-9A0A0J9YWB2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV7-9A0A0J9YWB2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 MIR4281-201ENST00000580852 62 ntBASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRBV7-9A0A0J9YWB2 AF131216.4-201ENST00000638924 1588 ntBASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 ESRRAP2-201ENST00000418437 1549 ntBASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV7-9A0A0J9YWB2 C9orf163-202ENST00000624034 2573 ntBASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 BHLHE23-202ENST00000612929 1109 ntBASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV7-9A0A0J9YWB2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 AC233723.2-201ENST00000623798 2106 ntBASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 DUX4L18-201ENST00000553347 1267 ntBASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV7-9A0A0J9YWB2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 ATP5G2P3-201ENST00000429083 425 ntBASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV7-9A0A0J9YWB2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PKD1P6-201ENST00000343738 4769 ntBASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV7-9A0A0J9YWB2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV7-9A0A0J9YWB2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms