Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV4A0A0C4DH28 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 Z92544.1-202ENST00000571933 1220 ntBASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 SNX5-217ENST00000606557 1087 ntBASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 AC021242.3-201ENST00000607598 1377 ntBASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV4A0A0C4DH28 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 DUSP8P5-201ENST00000422884 1815 ntBASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV4A0A0C4DH28 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 AC239859.2-201ENST00000444165 318 ntBASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV4A0A0C4DH28 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 MIR4787-201ENST00000607364 84 ntBASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRGV4A0A0C4DH28 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 AC009299.2-201ENST00000482477 511 ntBASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 MTDHP2-201ENST00000601468 714 ntBASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV4A0A0C4DH28 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms