Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV8-6A0A0B4J262 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 MIR6765-201ENST00000614092 87 ntBASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV8-6A0A0B4J262 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV8-6A0A0B4J262 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 AC073130.3-201ENST00000624389 2278 ntBASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV8-6A0A0B4J262 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV8-6A0A0B4J262 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 DUSP8P3-201ENST00000399571 1760 ntBASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV8-6A0A0B4J262 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 AC004812.2-201ENST00000611079 2094 ntBASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 KRT18P60-201ENST00000312876 1297 ntBASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV8-6A0A0B4J262 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 AC129492.7-201ENST00000622992 756 ntBASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV8-6A0A0B4J262 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-6A0A0B4J262 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV8-6A0A0B4J262 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms