Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AK2-208ENST00000487289 920 ntTSL 2 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 AC010503.4-201ENST00000615487 688 ntBASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 GBAP1-208ENST00000566701 1546 ntBASIC20.32■□□□□ 0.84
SHANK2Q9UPX8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 HLA-W-207ENST00000439514 771 ntBASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 SRP14-208ENST00000560773 468 ntTSL 3 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 AC006116.2-201ENST00000589958 988 ntBASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC20.31■□□□□ 0.84
SHANK2Q9UPX8 AL137244.1-201ENST00000422931 865 ntBASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 FDPSP7-201ENST00000429043 1054 ntBASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 SRL-202ENST00000537996 1814 ntTSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 AL031587.5-201ENST00000624344 1849 ntBASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 SNORA47-201ENST00000458862 138 ntBASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHANK2Q9UPX8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHANK2Q9UPX8 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms