Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AC112693.3-201ENST00000624819 1983 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AC103592.1-201ENST00000394513 664 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AL954722.1-201ENST00000431238 259 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 EEF1DP2-201ENST00000433698 843 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 OR52V1P-201ENST00000515557 898 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AC022001.3-201ENST00000606330 596 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 AL031673.1-201ENST00000611460 466 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 COG6-212ENST00000630730 186 ntTSL 5 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZC3H4Q9UPT8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 SIGLEC20P-201ENST00000595243 1311 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 FER1L4-210ENST00000615531 5998 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AC007679.1-201ENST00000458609 502 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AF186996.6-201ENST00000485294 149 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AL512310.5-201ENST00000551999 515 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 RN7SL478P-201ENST00000584358 298 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 AC148476.1-201ENST00000622182 705 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.87■□□□□ 0.29
ZC3H4Q9UPT8 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 AC008620.2-201ENST00000510294 1569 ntBASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 POLR2LP1-206ENST00000444785 187 ntBASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC16.86■□□□□ 0.29
ZC3H4Q9UPT8 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms