Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 COX5BP8-201ENST00000416911 349 ntBASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 AC100850.1-201ENST00000506768 649 ntBASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 CR383656.12-201ENST00000549567 513 ntBASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 Z98259.2-201ENST00000641583 609 ntBASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
THUMPD1Q9NXG2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 KLF2P4-201ENST00000451959 1225 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 AP005018.1-201ENST00000525475 301 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 AC003686.1-201ENST00000550956 1034 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 AC144522.1-201ENST00000625111 1658 ntBASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
THUMPD1Q9NXG2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms