Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 AL157791.1-201ENST00000553667 1699 ntBASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 NUTM2HP-201ENST00000442076 2498 ntBASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PDLIM5Q96HC4 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PDLIM5Q96HC4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
PDLIM5Q96HC4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.77□□□□□ -0.2
PDLIM5Q96HC4 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.77□□□□□ -0.2
PDLIM5Q96HC4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PDLIM5Q96HC4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
PDLIM5Q96HC4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 FRMPD2B-201ENST00000431305 1347 ntBASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SLC25A15P3-201ENST00000505530 290 ntBASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 AL365181.3-201ENST00000605886 3222 ntBASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.77□□□□□ -0.21
PDLIM5Q96HC4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 KRT8P43-201ENST00000406052 1458 ntBASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 MKRN5P-201ENST00000445263 1467 ntBASIC13.76□□□□□ -0.21
PDLIM5Q96HC4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms