Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 BRWD1P1-201ENST00000401091 371 ntBASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 PFN1P12-201ENST00000455938 534 ntBASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 CR392039.2-201ENST00000623182 509 ntBASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 AC061965.1-201ENST00000560524 1465 ntBASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TTC9CQ8N5M4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 GOLGA2P8-201ENST00000505201 779 ntBASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 MARK2P5-201ENST00000507649 634 ntBASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms