Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC138951.2-201ENST00000623455 1161 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 AC006453.4-201ENST00000636949 1252 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRC28Q86X40 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 AL031719.1-201ENST00000623365 2587 ntBASIC12.69□□□□□ -0.38
LRRC28Q86X40 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LRRC28Q86X40 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 AHCYP2-201ENST00000430630 1300 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 FAM21FP-201ENST00000426241 1131 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 AC245100.3-201ENST00000441281 285 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 BNIP3P42-201ENST00000454982 569 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 AC103988.2-201ENST00000561804 725 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 BNIP3P29-201ENST00000598302 571 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 AC011447.5-201ENST00000616168 564 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 AL022323.5-201ENST00000624101 2059 ntBASIC12.68□□□□□ -0.38
LRRC28Q86X40 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LRRC28Q86X40 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRC28Q86X40 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRC28Q86X40 YBX1P6-201ENST00000442962 1002 ntBASIC12.67□□□□□ -0.38
LRRC28Q86X40 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRC28Q86X40 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms