Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AL354877.1-201ENST00000424412 413 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 HLA-V-201ENST00000429037 534 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 CSF2RBP1-201ENST00000447905 391 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AL512310.5-201ENST00000551999 515 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 KRT18P8-201ENST00000581937 1246 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC005962.1-201ENST00000584100 773 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC010328.2-201ENST00000597698 1111 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 BAP1-211ENST00000615113 489 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC090386.2-201ENST00000623010 1039 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AL035252.4-201ENST00000624174 288 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC130686.1-201ENST00000622936 2466 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC023794.5-201ENST00000564380 2157 ntBASIC9.43□□□□□ -0.9
SYCNQ0VAF6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
SYCNQ0VAF6 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AC015818.8-201ENST00000587907 1519 ntBASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AHCYP4-201ENST00000419201 1315 ntBASIC9.42□□□□□ -0.9
SYCNQ0VAF6 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 TUBB8P8-201ENST00000458717 1058 ntBASIC9.42□□□□□ -0.9
SYCNQ0VAF6 ATP6V0CP2-201ENST00000469409 207 ntBASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 AGER-214ENST00000538695 487 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC9.42□□□□□ -0.9
SYCNQ0VAF6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms