Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 AC098591.1-202ENST00000507914 937 ntBASIC12.9□□□□□ -0.34
CACNA1BQ00975 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 PEBP1P1-201ENST00000554856 510 ntBASIC12.9□□□□□ -0.34
CACNA1BQ00975 RN7SL624P-201ENST00000580297 278 ntBASIC12.9□□□□□ -0.34
CACNA1BQ00975 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 CLPP-204ENST00000596149 745 ntTSL 2 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 KF455155.1-201ENST00000604493 303 ntBASIC12.9□□□□□ -0.34
CACNA1BQ00975 AC009812.1-201ENST00000605948 1059 ntBASIC12.9□□□□□ -0.34
CACNA1BQ00975 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.9□□□□□ -0.34
CACNA1BQ00975 AC011270.2-201ENST00000624293 2550 ntBASIC12.9□□□□□ -0.34
CACNA1BQ00975 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CACNA1BQ00975 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CACNA1BQ00975 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CACNA1BQ00975 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CACNA1BQ00975 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CACNA1BQ00975 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CACNA1BQ00975 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
CACNA1BQ00975 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CACNA1BQ00975 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CACNA1BQ00975 AC139712.1-201ENST00000378256 1875 ntBASIC12.9□□□□□ -0.35
CACNA1BQ00975 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CACNA1BQ00975 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ALDOAP2-201ENST00000398050 1076 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 RN7SL76P-201ENST00000482435 289 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC233724.9-201ENST00000511694 407 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 OR52P2P-201ENST00000527287 955 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 PTPRT-212ENST00000620410 940 ntTSL 5 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 PCDHA1-201ENST00000378133 2726 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 PRDX3P2-201ENST00000447051 611 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 RN7SL452P-201ENST00000482923 291 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AL357137.1-201ENST00000604645 203 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC116036.2-201ENST00000607592 462 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 MIR7704-201ENST00000610524 59 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 AC064801.2-201ENST00000625052 1303 ntBASIC12.89□□□□□ -0.35
CACNA1BQ00975 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.89□□□□□ -0.35
CACNA1BQ00975 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CACNA1BQ00975 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CACNA1BQ00975 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.88□□□□□ -0.35
CACNA1BQ00975 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CACNA1BQ00975 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CACNA1BQ00975 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CACNA1BQ00975 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CACNA1BQ00975 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CACNA1BQ00975 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms