Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 AC144522.1-201ENST00000625111 1658 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 AC092580.1-201ENST00000433998 658 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 KLF2P1-201ENST00000447438 1042 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CDK5Q00535 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
CDK5Q00535 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.78□□□□□ -0.36
CDK5Q00535 GOLGA2P8-201ENST00000505201 779 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 AC009884.2-201ENST00000603110 324 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.78□□□□□ -0.36
CDK5Q00535 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.78□□□□□ -0.36
CDK5Q00535 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.78□□□□□ -0.36
CDK5Q00535 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CDK5Q00535 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.78□□□□□ -0.36
CDK5Q00535 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.78□□□□□ -0.36
CDK5Q00535 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDK5Q00535 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.77□□□□□ -0.36
CDK5Q00535 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CDK5Q00535 CYP4F23P-201ENST00000593402 1579 ntBASIC12.77□□□□□ -0.36
CDK5Q00535 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDK5Q00535 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.77□□□□□ -0.36
CDK5Q00535 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDK5Q00535 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.77□□□□□ -0.36
CDK5Q00535 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.77□□□□□ -0.36
CDK5Q00535 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDK5Q00535 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.77□□□□□ -0.36
CDK5Q00535 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDK5Q00535 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.77□□□□□ -0.36
CDK5Q00535 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.77□□□□□ -0.36
CDK5Q00535 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.77□□□□□ -0.37
CDK5Q00535 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.77□□□□□ -0.37
CDK5Q00535 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.77□□□□□ -0.37
CDK5Q00535 BCRP1-201ENST00000444246 691 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.77□□□□□ -0.37
CDK5Q00535 AC007551.1-201ENST00000457394 519 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 AC092183.1-201ENST00000469884 875 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 AC100850.1-201ENST00000506768 649 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.77□□□□□ -0.37
CDK5Q00535 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.77□□□□□ -0.37
CDK5Q00535 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.77□□□□□ -0.37
CDK5Q00535 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.77□□□□□ -0.37
CDK5Q00535 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.77□□□□□ -0.37
CDK5Q00535 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.37
CDK5Q00535 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.77□□□□□ -0.37
CDK5Q00535 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.77□□□□□ -0.37
CDK5Q00535 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.77□□□□□ -0.37
CDK5Q00535 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.77□□□□□ -0.37
CDK5Q00535 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.77□□□□□ -0.37
CDK5Q00535 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 AHCYP2-201ENST00000430630 1300 ntBASIC12.77□□□□□ -0.37
CDK5Q00535 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.77□□□□□ -0.37
CDK5Q00535 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDK5Q00535 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms