Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ERP29P1-201ENST00000442902 706 ntBASIC13.75□□□□□ -0.21
PDX1P52945 DPY19L2P5-201ENST00000456300 331 ntBASIC13.75□□□□□ -0.21
PDX1P52945 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 ALG1L13P-202ENST00000519320 584 ntBASIC13.75□□□□□ -0.21
PDX1P52945 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.75□□□□□ -0.21
PDX1P52945 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
PDX1P52945 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
PDX1P52945 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PDX1P52945 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PDX1P52945 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.75□□□□□ -0.21
PDX1P52945 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.74□□□□□ -0.21
PDX1P52945 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PDX1P52945 BAK1P1-201ENST00000317045 636 ntBASIC13.74□□□□□ -0.21
PDX1P52945 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.74□□□□□ -0.21
PDX1P52945 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.74□□□□□ -0.21
PDX1P52945 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 HERC2P11-201ENST00000562845 725 ntBASIC13.74□□□□□ -0.21
PDX1P52945 AC100756.2-201ENST00000569537 736 ntBASIC13.74□□□□□ -0.21
PDX1P52945 AC138466.5-201ENST00000624002 808 ntBASIC13.74□□□□□ -0.21
PDX1P52945 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.74□□□□□ -0.21
PDX1P52945 LINC00431-202ENST00000636375 159 ntBASIC13.74□□□□□ -0.21
PDX1P52945 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.74□□□□□ -0.21
PDX1P52945 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PDX1P52945 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 AC006372.4-201ENST00000624122 1543 ntBASIC13.74□□□□□ -0.21
PDX1P52945 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PDX1P52945 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.74□□□□□ -0.21
PDX1P52945 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.73□□□□□ -0.21
PDX1P52945 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.73□□□□□ -0.21
PDX1P52945 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.73□□□□□ -0.21
PDX1P52945 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PDX1P52945 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
PDX1P52945 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.73□□□□□ -0.21
PDX1P52945 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms