Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK7P50613 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK7P50613 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDK7P50613 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 AC041040.2-201ENST00000622926 2899 ntBASIC15.54■□□□□ 0.08
CDK7P50613 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 OR2I1P-210ENST00000642037 4691 ntBASIC15.54■□□□□ 0.08
CDK7P50613 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK7P50613 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 AJ011931.1-201ENST00000618749 2492 ntBASIC15.54■□□□□ 0.08
CDK7P50613 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 AC117503.4-201ENST00000623229 1418 ntBASIC15.54■□□□□ 0.08
CDK7P50613 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDK7P50613 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDK7P50613 OR10N1P-201ENST00000392758 869 ntBASIC15.54■□□□□ 0.08
CDK7P50613 AC103592.1-201ENST00000394513 664 ntBASIC15.54■□□□□ 0.08
CDK7P50613 OR2W2P-201ENST00000406313 909 ntBASIC15.54■□□□□ 0.08
CDK7P50613 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK7P50613 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 AC023906.1-201ENST00000486386 453 ntBASIC15.54■□□□□ 0.08
CDK7P50613 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK7P50613 BCRP4-201ENST00000506079 804 ntBASIC15.54■□□□□ 0.08
CDK7P50613 AC093300.1-201ENST00000510368 1201 ntBASIC15.54■□□□□ 0.08
CDK7P50613 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK7P50613 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK7P50613 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK7P50613 AC018846.1-201ENST00000568231 183 ntBASIC15.54■□□□□ 0.08
CDK7P50613 AC132825.4-202ENST00000578792 434 ntBASIC15.54■□□□□ 0.08
CDK7P50613 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.54■□□□□ 0.08
CDK7P50613 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 OR2I1P-209ENST00000641730 5365 ntBASIC15.54■□□□□ 0.08
CDK7P50613 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.54■□□□□ 0.08
CDK7P50613 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 LINC00552-201ENST00000625151 2579 ntBASIC15.54■□□□□ 0.08
CDK7P50613 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDK7P50613 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK7P50613 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 AC018529.2-202ENST00000611482 3087 ntBASIC15.54■□□□□ 0.08
CDK7P50613 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK7P50613 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK7P50613 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK7P50613 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK7P50613 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CDK7P50613 RN7SL147P-201ENST00000487345 298 ntBASIC15.53■□□□□ 0.08
CDK7P50613 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK7P50613 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK7P50613 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK7P50613 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK7P50613 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.53■□□□□ 0.08
CDK7P50613 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.53■□□□□ 0.08
CDK7P50613 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms