Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 AC234644.1-201ENST00000406065 370 ntBASIC16.62■□□□□ 0.25
MRE11P49959 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 AC123567.1-201ENST00000548294 1261 ntBASIC16.62■□□□□ 0.25
MRE11P49959 BANF1P1-201ENST00000553684 263 ntBASIC16.62■□□□□ 0.25
MRE11P49959 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.62■□□□□ 0.25
MRE11P49959 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.62■□□□□ 0.25
MRE11P49959 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MRE11P49959 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRE11P49959 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MRE11P49959 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC16.62■□□□□ 0.25
MRE11P49959 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.61■□□□□ 0.25
MRE11P49959 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 TOMM22P5-201ENST00000416399 439 ntBASIC16.61■□□□□ 0.25
MRE11P49959 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.61■□□□□ 0.25
MRE11P49959 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.61■□□□□ 0.25
MRE11P49959 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.61■□□□□ 0.25
MRE11P49959 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 SORD2P-201ENST00000558556 1069 ntBASIC16.61■□□□□ 0.25
MRE11P49959 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.61■□□□□ 0.25
MRE11P49959 AC105021.1-202ENST00000570572 669 ntBASIC16.61■□□□□ 0.25
MRE11P49959 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 MRPL37P1-201ENST00000592451 1337 ntBASIC16.61■□□□□ 0.25
MRE11P49959 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 AC104758.3-203ENST00000562938 2123 ntBASIC16.61■□□□□ 0.25
MRE11P49959 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 KRT8P12-202ENST00000472924 1397 ntBASIC16.61■□□□□ 0.25
MRE11P49959 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MRE11P49959 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC16.61■□□□□ 0.25
MRE11P49959 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRE11P49959 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms