Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CLK1P49759 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 MRPL37P1-201ENST00000592451 1337 ntBASIC13.44□□□□□ -0.26
CLK1P49759 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 KLF2P4-201ENST00000451959 1225 ntBASIC13.44□□□□□ -0.26
CLK1P49759 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 GCOM2-201ENST00000509133 1104 ntBASIC13.44□□□□□ -0.26
CLK1P49759 AC078819.1-201ENST00000547454 765 ntBASIC13.44□□□□□ -0.26
CLK1P49759 AC012085.1-201ENST00000548270 765 ntBASIC13.44□□□□□ -0.26
CLK1P49759 AC023310.1-201ENST00000554836 735 ntBASIC13.44□□□□□ -0.26
CLK1P49759 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.44□□□□□ -0.26
CLK1P49759 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CLK1P49759 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 ECM1P1-201ENST00000604092 1279 ntBASIC13.44□□□□□ -0.26
CLK1P49759 AC244669.2-201ENST00000612320 853 ntBASIC13.44□□□□□ -0.26
CLK1P49759 AC138951.2-201ENST00000623455 1161 ntBASIC13.44□□□□□ -0.26
CLK1P49759 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.44□□□□□ -0.26
CLK1P49759 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CLK1P49759 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.44□□□□□ -0.26
CLK1P49759 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.44□□□□□ -0.26
CLK1P49759 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 AHCYP2-201ENST00000430630 1300 ntBASIC13.43□□□□□ -0.26
CLK1P49759 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.43□□□□□ -0.26
CLK1P49759 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.43□□□□□ -0.26
CLK1P49759 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 RN7SKP175-201ENST00000408472 289 ntBASIC13.43□□□□□ -0.26
CLK1P49759 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.43□□□□□ -0.26
CLK1P49759 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 AC008825.2-201ENST00000603374 718 ntBASIC13.43□□□□□ -0.26
CLK1P49759 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
CLK1P49759 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.43□□□□□ -0.26
CLK1P49759 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
CLK1P49759 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLK1P49759 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms