Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 AC005562.1-201ENST00000583030 3219 ntBASIC12.97□□□□□ -0.33
CENPAP49450 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CENPAP49450 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
CENPAP49450 KRT43P-201ENST00000434019 910 ntBASIC12.97□□□□□ -0.33
CENPAP49450 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.97□□□□□ -0.33
CENPAP49450 USP32P1-208ENST00000506594 1164 ntBASIC12.97□□□□□ -0.33
CENPAP49450 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.97□□□□□ -0.33
CENPAP49450 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.97□□□□□ -0.33
CENPAP49450 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.97□□□□□ -0.33
CENPAP49450 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 AL136301.1-201ENST00000615830 422 ntBASIC12.97□□□□□ -0.33
CENPAP49450 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.97□□□□□ -0.33
CENPAP49450 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 AL358472.5-202ENST00000641448 1267 ntBASIC12.97□□□□□ -0.33
CENPAP49450 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 AC099521.3-201ENST00000624251 2938 ntBASIC12.97□□□□□ -0.33
CENPAP49450 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.97□□□□□ -0.33
CENPAP49450 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.96□□□□□ -0.33
CENPAP49450 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 KRT17P7-201ENST00000451704 1104 ntBASIC12.96□□□□□ -0.33
CENPAP49450 CICP12-201ENST00000455801 843 ntBASIC12.96□□□□□ -0.33
CENPAP49450 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.96□□□□□ -0.33
CENPAP49450 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.96□□□□□ -0.33
CENPAP49450 AL596325.1-201ENST00000563991 1082 ntBASIC12.96□□□□□ -0.33
CENPAP49450 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 RN7SL713P-201ENST00000582127 302 ntBASIC12.96□□□□□ -0.33
CENPAP49450 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.96□□□□□ -0.33
CENPAP49450 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 AC006453.4-201ENST00000636949 1252 ntBASIC12.96□□□□□ -0.33
CENPAP49450 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.96□□□□□ -0.33
CENPAP49450 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CENPAP49450 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.96□□□□□ -0.33
CENPAP49450 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms