Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.32□□□□□ -0.28
CHMP24386 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 AC012441.2-201ENST00000444843 739 ntBASIC13.32□□□□□ -0.28
CHMP24386 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 CICP12-201ENST00000455801 843 ntBASIC13.32□□□□□ -0.28
CHMP24386 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.32□□□□□ -0.28
CHMP24386 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.32□□□□□ -0.28
CHMP24386 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 AC064801.2-201ENST00000625052 1303 ntBASIC13.32□□□□□ -0.28
CHMP24386 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.32□□□□□ -0.28
CHMP24386 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CHMP24386 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.32□□□□□ -0.28
CHMP24386 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CHMP24386 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CHMP24386 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 AC135782.3-201ENST00000562782 2105 ntBASIC13.31□□□□□ -0.28
CHMP24386 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.31□□□□□ -0.28
CHMP24386 SERPINA13P-202ENST00000478994 924 ntBASIC13.31□□□□□ -0.28
CHMP24386 AC099548.2-209ENST00000480264 625 ntBASIC13.31□□□□□ -0.28
CHMP24386 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.31□□□□□ -0.28
CHMP24386 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.31□□□□□ -0.28
CHMP24386 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.31□□□□□ -0.28
CHMP24386 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.31□□□□□ -0.28
CHMP24386 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 AC005730.2-201ENST00000564549 1184 ntBASIC13.31□□□□□ -0.28
CHMP24386 AC005324.6-201ENST00000587972 613 ntBASIC13.31□□□□□ -0.28
CHMP24386 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 AC009884.2-201ENST00000603110 324 ntBASIC13.31□□□□□ -0.28
CHMP24386 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 GPR182-203ENST00000622922 591 ntBASIC13.31□□□□□ -0.28
CHMP24386 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CHMP24386 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CHMP24386 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CHMP24386 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CHMP24386 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
CHMP24386 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
CHMP24386 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CHMP24386 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHMP24386 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHMP24386 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms