Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.33□□□□□ -0.12
VCLP18206 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.33□□□□□ -0.12
VCLP18206 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 AC006122.1-201ENST00000493323 440 ntBASIC14.33□□□□□ -0.12
VCLP18206 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.33□□□□□ -0.12
VCLP18206 MARK2P5-201ENST00000507649 634 ntBASIC14.33□□□□□ -0.12
VCLP18206 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.33□□□□□ -0.12
VCLP18206 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.33□□□□□ -0.12
VCLP18206 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 NDUFV2P1-201ENST00000596415 907 ntBASIC14.33□□□□□ -0.12
VCLP18206 AL132994.2-201ENST00000603120 687 ntBASIC14.33□□□□□ -0.12
VCLP18206 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.33□□□□□ -0.12
VCLP18206 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VCLP18206 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 CICP16-201ENST00000502609 2813 ntBASIC14.33□□□□□ -0.12
VCLP18206 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 HSPA8P5-201ENST00000456928 2069 ntBASIC14.32□□□□□ -0.12
VCLP18206 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 TMBIM7P-202ENST00000641474 1516 ntBASIC14.32□□□□□ -0.12
VCLP18206 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
VCLP18206 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.32□□□□□ -0.12
VCLP18206 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 BX284668.4-201ENST00000453917 508 ntBASIC14.32□□□□□ -0.12
VCLP18206 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.32□□□□□ -0.12
VCLP18206 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.32□□□□□ -0.12
VCLP18206 HLA-J-204ENST00000495278 958 ntBASIC14.32□□□□□ -0.12
VCLP18206 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 SCARNA21-201ENST00000517026 139 ntBASIC14.32□□□□□ -0.12
VCLP18206 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 AC005586.2-201ENST00000563946 837 ntBASIC14.32□□□□□ -0.12
VCLP18206 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.32□□□□□ -0.12
VCLP18206 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 AHCYP4-201ENST00000419201 1315 ntBASIC14.32□□□□□ -0.12
VCLP18206 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VCLP18206 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VCLP18206 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VCLP18206 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VCLP18206 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.31□□□□□ -0.12
VCLP18206 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VCLP18206 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.31□□□□□ -0.12
VCLP18206 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VCLP18206 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VCLP18206 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VCLP18206 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms