Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 RPL13AP3-202ENST00000494676 1473 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 AC005562.1-201ENST00000583030 3219 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.57□□□□□ -0.4
CTLA4P16410 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 AL139158.3-201ENST00000641212 1562 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 OR8S1-201ENST00000310194 1080 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTLA4P16410 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 ATP5G2P4-201ENST00000442175 420 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.57□□□□□ -0.4
CTLA4P16410 RN7SL277P-201ENST00000481521 288 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.57□□□□□ -0.4
CTLA4P16410 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 GOLGA2P8-201ENST00000505201 779 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.57□□□□□ -0.4
CTLA4P16410 AC009779.1-201ENST00000551138 283 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.57□□□□□ -0.4
CTLA4P16410 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 AL157813.1-201ENST00000612996 587 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CTLA4P16410 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.57□□□□□ -0.4
CTLA4P16410 AC004241.5-201ENST00000623870 2448 ntBASIC12.57□□□□□ -0.4
CTLA4P16410 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CTLA4P16410 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CTLA4P16410 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CTLA4P16410 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 AL445209.1-201ENST00000607269 3491 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 AC099521.3-201ENST00000624251 2938 ntBASIC12.56□□□□□ -0.4
CTLA4P16410 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.56□□□□□ -0.4
CTLA4P16410 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.56□□□□□ -0.4
CTLA4P16410 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTLA4P16410 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms