Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 USB1-207ENST00000563149 1751 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.2■□□□□ 0.02
TUBB4AP04350 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TUBB4AP04350 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TUBB4AP04350 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 AC102953.2-201ENST00000609755 3026 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.19■□□□□ 0.02
TUBB4AP04350 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 HMGN1P19-201ENST00000436976 333 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 CNN2P2-201ENST00000443536 909 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 CNN2P3-201ENST00000450201 906 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 AL589987.1-201ENST00000453380 819 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TUBB4AP04350 AC067863.1-201ENST00000494933 530 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.19■□□□□ 0.02
TUBB4AP04350 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.19■□□□□ 0.02
TUBB4AP04350 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.19■□□□□ 0.02
TUBB4AP04350 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 AP001462.1-201ENST00000594089 452 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 AL136317.3-201ENST00000618497 906 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TUBB4AP04350 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TUBB4AP04350 IL9RP3-201ENST00000442856 1674 ntBASIC15.19■□□□□ 0.02
TUBB4AP04350 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC15.19■□□□□ 0.02
TUBB4AP04350 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TUBB4AP04350 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBB4AP04350 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBB4AP04350 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBB4AP04350 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TUBB4AP04350 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBB4AP04350 AC011481.3-201ENST00000623895 5594 ntBASIC15.18■□□□□ 0.02
TUBB4AP04350 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBB4AP04350 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TUBB4AP04350 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TUBB4AP04350 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.18■□□□□ 0.02
TUBB4AP04350 MEP1AP4-201ENST00000423244 1087 ntBASIC15.18■□□□□ 0.02
TUBB4AP04350 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBB4AP04350 AL442647.2-201ENST00000429864 857 ntBASIC15.18■□□□□ 0.02
TUBB4AP04350 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.18■□□□□ 0.02
TUBB4AP04350 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.18■□□□□ 0.02
TUBB4AP04350 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms