Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CNOT4O95628 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.69□□□□□ -0.38
CNOT4O95628 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.68□□□□□ -0.38
CNOT4O95628 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.68□□□□□ -0.38
CNOT4O95628 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.68□□□□□ -0.38
CNOT4O95628 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.68□□□□□ -0.38
CNOT4O95628 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.68□□□□□ -0.38
CNOT4O95628 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.68□□□□□ -0.38
CNOT4O95628 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.68□□□□□ -0.38
CNOT4O95628 MIR6769A-201ENST00000617340 73 ntBASIC12.68□□□□□ -0.38
CNOT4O95628 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 LINC01165-201ENST00000445190 1623 ntBASIC12.68□□□□□ -0.38
CNOT4O95628 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 AP002353.1-201ENST00000528257 1599 ntBASIC12.68□□□□□ -0.38
CNOT4O95628 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CNOT4O95628 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.68□□□□□ -0.38
CNOT4O95628 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.68□□□□□ -0.38
CNOT4O95628 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CNOT4O95628 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CNOT4O95628 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.67□□□□□ -0.38
CNOT4O95628 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.67□□□□□ -0.38
CNOT4O95628 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 AC092580.1-201ENST00000433998 658 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.67□□□□□ -0.38
CNOT4O95628 AC234782.1-201ENST00000451950 919 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.67□□□□□ -0.38
CNOT4O95628 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 LINC01922-201ENST00000562582 719 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC12.67□□□□□ -0.38
CNOT4O95628 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CNOT4O95628 MIR4754-201ENST00000582477 89 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.67□□□□□ -0.38
CNOT4O95628 LINC01783-202ENST00000614408 828 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 BX284668.2-205ENST00000619677 828 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms