Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
ALX3O95076 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
ALX3O95076 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
ALX3O95076 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.65□□□□□ -0.38
ALX3O95076 SERBP1P5-201ENST00000510079 1181 ntBASIC12.65□□□□□ -0.38
ALX3O95076 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.65□□□□□ -0.38
ALX3O95076 FAM8A2P-201ENST00000528813 1142 ntBASIC12.65□□□□□ -0.38
ALX3O95076 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.65□□□□□ -0.38
ALX3O95076 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.65□□□□□ -0.38
ALX3O95076 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.65□□□□□ -0.38
ALX3O95076 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.65□□□□□ -0.38
ALX3O95076 AC132938.4-201ENST00000623835 848 ntBASIC12.65□□□□□ -0.38
ALX3O95076 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.65□□□□□ -0.38
ALX3O95076 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.65□□□□□ -0.38
ALX3O95076 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.65□□□□□ -0.38
ALX3O95076 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALX3O95076 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ALX3O95076 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ALX3O95076 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ALX3O95076 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 FKBP4P6-201ENST00000457486 1332 ntBASIC12.64□□□□□ -0.39
ALX3O95076 TUBB8P4-201ENST00000511806 1324 ntBASIC12.64□□□□□ -0.39
ALX3O95076 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 AL445209.1-201ENST00000607269 3491 ntBASIC12.64□□□□□ -0.39
ALX3O95076 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.64□□□□□ -0.39
ALX3O95076 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 CCT7P1-201ENST00000406551 1611 ntBASIC12.64□□□□□ -0.39
ALX3O95076 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
ALX3O95076 ACTG1P3-201ENST00000431775 1114 ntBASIC12.64□□□□□ -0.39
ALX3O95076 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.64□□□□□ -0.39
ALX3O95076 U91328.1-201ENST00000437528 223 ntBASIC12.64□□□□□ -0.39
ALX3O95076 AC012441.1-201ENST00000446669 685 ntBASIC12.64□□□□□ -0.39
ALX3O95076 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 AC092658.1-201ENST00000505836 891 ntBASIC12.64□□□□□ -0.39
ALX3O95076 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.64□□□□□ -0.39
ALX3O95076 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.64□□□□□ -0.39
ALX3O95076 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
ALX3O95076 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 AC004233.3-201ENST00000607794 1269 ntBASIC12.64□□□□□ -0.39
ALX3O95076 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.64□□□□□ -0.39
ALX3O95076 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ALX3O95076 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALX3O95076 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALX3O95076 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.63□□□□□ -0.39
ALX3O95076 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms