Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AC021016.3-201ENST00000608367 477 ntBASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AL023803.2-201ENST00000620080 638 ntBASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 AC133540.1-201ENST00000620845 1019 ntBASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 NME1-209ENST00000511355 1645 ntTSL 5 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
HLA-DRB4X5D2U9 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 USP17L6P-201ENST00000382470 1197 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 KLF2P1-201ENST00000447438 1042 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 RPL13AP20-201ENST00000459725 609 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC021723.1-201ENST00000486306 515 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC005962.1-201ENST00000584100 773 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TUBB1P2-201ENST00000422712 1306 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TUBB1P1-201ENST00000503144 1300 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 KRT8P29-201ENST00000420409 1371 ntBASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
HLA-DRB4X5D2U9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms