Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AC018529.2-202ENST00000611482 3087 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 CACYBPP3-201ENST00000406011 625 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 RNA5SP407-201ENST00000410275 110 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AL391822.1-201ENST00000452580 562 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 SNORA47-201ENST00000458862 138 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 FPGT-205ENST00000482102 561 ntTSL 4 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 WSB1-213ENST00000583193 552 ntTSL 4 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AC244102.2-201ENST00000597568 955 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 CD9-212ENST00000610354 1315 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 MED20-204ENST00000409312 932 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AC006987.4-201ENST00000430032 279 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 HNRNPA1P30-202ENST00000440699 997 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 PFN1P10-201ENST00000455962 327 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AC098591.1-202ENST00000507914 937 ntBASIC12.74□□□□□ -0.37
CHD8Q9HCK8 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 MDC1-209ENST00000613547 830 ntTSL 5 BASIC12.74□□□□□ -0.37
CHD8Q9HCK8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 AC105443.1-201ENST00000433754 712 ntBASIC12.73□□□□□ -0.37
CHD8Q9HCK8 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 DNM1P17-201ENST00000512082 426 ntBASIC12.73□□□□□ -0.37
CHD8Q9HCK8 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC12.73□□□□□ -0.37
CHD8Q9HCK8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHD8Q9HCK8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms