Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 RPL13AP3-202ENST00000494676 1473 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 WDR54-202ENST00000409791 854 ntTSL 3 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 RN7SL767P-201ENST00000493013 295 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 HNRNPA1P72-201ENST00000529511 967 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 KRT8P2-201ENST00000556193 944 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 RN7SL605P-201ENST00000577229 281 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 MIR4459-201ENST00000581837 66 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC134878.2-201ENST00000620700 1265 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AL157414.3-201ENST00000624276 1954 ntBASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CNTNAP3Q9BZ76 AC007292.2-201ENST00000593524 1812 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC126335.2-201ENST00000623362 4637 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC138761.6-201ENST00000583997 1423 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC069061.4-201ENST00000581294 1347 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC023908.3-201ENST00000564211 3047 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 Z97985.1-201ENST00000332270 946 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 PPP1R2P10-201ENST00000393023 595 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 U3.41-201ENST00000408711 219 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AL359092.2-201ENST00000423330 585 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 DUX4L31-201ENST00000446466 1136 ntBASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNTNAP3Q9BZ76 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms