Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRIM55Q9BYV6 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 MIR326-201ENST00000362220 95 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 ACKR1-201ENST00000368121 1240 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 CNN2P8-201ENST00000421872 913 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 FAM86HP-204ENST00000513466 959 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AC025279.2-201ENST00000569730 653 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 KRT18P8-201ENST00000581937 1246 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AC093813.1-201ENST00000605066 256 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AL118558.3-201ENST00000607414 1079 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 AL139099.5-201ENST00000635274 300 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM55Q9BYV6 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AC139712.1-201ENST00000378256 1875 ntBASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AL391647.1-201ENST00000395664 511 ntBASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 FAM197Y7-201ENST00000432892 766 ntBASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 BX539320.1-201ENST00000623759 877 ntBASIC14.42□□□□□ -0.1
TRIM55Q9BYV6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms