Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHCHD1Q96BP2 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PXK-210ENST00000479241 2817 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 RCC2P1-201ENST00000452257 1476 ntBASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 LPP-AS2-201ENST00000605573 2852 ntBASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 RN7SL850P-201ENST00000579959 291 ntBASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AC008764.8-201ENST00000623966 2717 ntBASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 MARK2P16-201ENST00000605714 1723 ntBASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
CHCHD1Q96BP2 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC10.29□□□□□ -0.76
CHCHD1Q96BP2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms