Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR6074-201ENST00000612054 107 ntBASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 LINC00115-201ENST00000473798 1317 ntBASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AL357563.1-201ENST00000404728 395 ntBASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AC007250.1-201ENST00000608934 338 ntBASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AC027612.1-201ENST00000445234 2395 ntBASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SHKBP1Q8TBC3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 AC098934.1-203ENST00000442868 1262 ntBASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 AC068867.1-201ENST00000559855 150 ntBASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 AC127024.7-201ENST00000625101 200 ntBASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 MST1P2-201ENST00000457982 2291 ntBASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SHKBP1Q8TBC3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SHKBP1Q8TBC3 AC011498.7-201ENST00000624986 2027 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms