Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 Z98257.2-202ENST00000641138 1548 ntBASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLDN22Q8N7P3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 SALL4P6-201ENST00000429385 1691 ntBASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 CCT8L1P-201ENST00000465400 1674 ntBASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AL590824.1-201ENST00000403828 1349 ntBASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 KRT17P8-201ENST00000540749 863 ntBASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 RBM8B-201ENST00000555532 525 ntBASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.96□□□□□ -0.33
CLDN22Q8N7P3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.96□□□□□ -0.34
CLDN22Q8N7P3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.95□□□□□ -0.34
CLDN22Q8N7P3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms