Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14□□□□□ -0.17
TRIM48Q8IWZ4 COL6A4P2-202ENST00000504443 2753 ntBASIC14□□□□□ -0.17
TRIM48Q8IWZ4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AC140479.7-201ENST00000636301 2332 ntBASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 EEF1DP6-201ENST00000449232 372 ntBASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 RN7SL67P-201ENST00000492147 296 ntBASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AL133499.1-201ENST00000596207 608 ntBASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM48Q8IWZ4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AL583805.1-201ENST00000391389 531 ntBASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AL592076.1-201ENST00000424448 303 ntBASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AC026803.1-201ENST00000569130 274 ntBASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AC104506.1-201ENST00000609247 429 ntBASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 MEG3_2.1-201ENST00000611456 105 ntBASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms