Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HSPA7-201ENST00000445535 1927 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC023908.3-201ENST00000564211 3047 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC008620.2-201ENST00000510294 1569 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 BX640514.1-201ENST00000583223 1918 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 KRT18P42-201ENST00000505048 1255 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 RCC2P5-201ENST00000492126 1487 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 NRADDP-202ENST00000641269 1585 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 PHBP18-201ENST00000546648 813 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC011477.7-201ENST00000617163 1440 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 AC005011.1-201ENST00000455206 210 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 RN7SL202P-201ENST00000584410 262 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 AC063977.2-201ENST00000601996 421 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 HNRNPA3P12-201ENST00000437410 1063 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 ACTG1P23-201ENST00000437653 1074 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 PRDX3P2-201ENST00000447051 611 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 LILRP2-202ENST00000413572 1383 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13CQ709C8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 AC040160.2-201ENST00000623816 1675 ntBASIC11.34□□□□□ -0.59
VPS13CQ709C8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13CQ709C8 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
VPS13CQ709C8 RN7SL87P-201ENST00000497657 288 ntBASIC11.33□□□□□ -0.59
VPS13CQ709C8 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
VPS13CQ709C8 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
VPS13CQ709C8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13CQ709C8 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13CQ709C8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13CQ709C8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
VPS13CQ709C8 ABCC6P2-201ENST00000526069 590 ntBASIC11.33□□□□□ -0.6
VPS13CQ709C8 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13CQ709C8 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13CQ709C8 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
VPS13CQ709C8 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms