Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC139712.1-201ENST00000378256 1875 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 RNVU1-8-201ENST00000364272 125 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 SCARNA12-201ENST00000459155 270 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AL591471.1-201ENST00000621855 229 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 BRD7P5-201ENST00000299197 1822 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 AC027612.1-201ENST00000445234 2395 ntBASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CTC1Q2NKJ3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 TCAF1P1-201ENST00000414990 2232 ntBASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 HLA-DPA2-205ENST00000433582 733 ntBASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 GOLGA2P7-209ENST00000560408 745 ntBASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 AC010976.2-201ENST00000609697 852 ntBASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.11■□□□□ 0.01
CTC1Q2NKJ3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms