Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 AC145285.5-201ENST00000562217 361 ntBASIC18.29■□□□□ 0.52
CCDC27Q2M243 AC051619.9-201ENST00000623237 597 ntBASIC18.29■□□□□ 0.52
CCDC27Q2M243 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC27Q2M243 PES1P2-201ENST00000449745 1735 ntBASIC18.29■□□□□ 0.52
CCDC27Q2M243 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC27Q2M243 LSS-211ENST00000522411 2523 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 PDXDC2P-206ENST00000534700 1315 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 C8orf49-201ENST00000525043 1968 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 KRT8P19-201ENST00000551916 1455 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 AL627231.1-201ENST00000394467 1125 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 AC005722.1-201ENST00000431878 964 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 MIR3940-201ENST00000579148 102 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 AL049840.2-201ENST00000602722 535 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 AC108024.1-201ENST00000626286 1721 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 MYO15B-237ENST00000642007 4893 ntBASIC18.28■□□□□ 0.52
CCDC27Q2M243 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 DDC-214ENST00000622873 1839 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC27Q2M243 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC27Q2M243 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 CR383656.2-201ENST00000548656 2254 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 UPF3AP2-201ENST00000457924 1132 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 SCARNA12-201ENST00000459155 270 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 AC130709.1-201ENST00000484779 1212 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 ORAOV1P1-201ENST00000503108 395 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 MIR3907-201ENST00000579424 151 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 MIR4326-201ENST00000582203 59 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 MIR4522-201ENST00000584932 87 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC27Q2M243 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC27Q2M243 AC105206.1-202ENST00000314927 2368 ntBASIC18.27■□□□□ 0.52
CCDC27Q2M243 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms