Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MIR4326-201ENST00000582203 59 ntBASIC11.51□□□□□ -0.57
LMO4P61968 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC11.51□□□□□ -0.57
LMO4P61968 AC011247.3-201ENST00000603297 438 ntBASIC11.51□□□□□ -0.57
LMO4P61968 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LMO4P61968 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC11.51□□□□□ -0.57
LMO4P61968 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC11.51□□□□□ -0.57
LMO4P61968 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LMO4P61968 AC090643.2-201ENST00000623442 2029 ntBASIC11.51□□□□□ -0.57
LMO4P61968 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
LMO4P61968 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LMO4P61968 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
LMO4P61968 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.51□□□□□ -0.57
LMO4P61968 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LMO4P61968 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LMO4P61968 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LMO4P61968 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LMO4P61968 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC11.51□□□□□ -0.57
LMO4P61968 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC11.51□□□□□ -0.57
LMO4P61968 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.51□□□□□ -0.57
LMO4P61968 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
LMO4P61968 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 HSPA7-201ENST00000445535 1927 ntBASIC11.5□□□□□ -0.57
LMO4P61968 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 DDC-204ENST00000426377 1700 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 PSAT1P2-201ENST00000426107 972 ntBASIC11.5□□□□□ -0.57
LMO4P61968 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC11.5□□□□□ -0.57
LMO4P61968 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 GOLGA2P7-209ENST00000560408 745 ntBASIC11.5□□□□□ -0.57
LMO4P61968 AC141586.1-203ENST00000567242 366 ntBASIC11.5□□□□□ -0.57
LMO4P61968 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC11.5□□□□□ -0.57
LMO4P61968 AC008972.2-201ENST00000606587 494 ntBASIC11.5□□□□□ -0.57
LMO4P61968 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 OR2I1P-209ENST00000641730 5365 ntBASIC11.5□□□□□ -0.57
LMO4P61968 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 AC152010.1-201ENST00000415779 2006 ntBASIC11.5□□□□□ -0.57
LMO4P61968 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC11.5□□□□□ -0.57
LMO4P61968 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LMO4P61968 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.5□□□□□ -0.57
LMO4P61968 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.49□□□□□ -0.57
LMO4P61968 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 AC139749.1-202ENST00000617529 3139 ntBASIC11.49□□□□□ -0.57
LMO4P61968 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LMO4P61968 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
LMO4P61968 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.49□□□□□ -0.57
LMO4P61968 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LMO4P61968 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
LMO4P61968 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LMO4P61968 GGTLC4P-201ENST00000402176 664 ntBASIC11.49□□□□□ -0.57
LMO4P61968 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC11.49□□□□□ -0.57
LMO4P61968 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC11.49□□□□□ -0.57
LMO4P61968 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms