Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
WNT3AP56704 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.31□□□□□ -0.12
WNT3AP56704 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
WNT3AP56704 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
WNT3AP56704 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 AC092053.3-201ENST00000641308 4975 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 AC073869.1-201ENST00000415574 2762 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
WNT3AP56704 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
WNT3AP56704 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 ACTG1P2-201ENST00000415776 1125 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ACTG1P11-201ENST00000425411 1125 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.3□□□□□ -0.12
WNT3AP56704 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 AKR7A2P1-201ENST00000460134 915 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.3□□□□□ -0.12
WNT3AP56704 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.3□□□□□ -0.12
WNT3AP56704 AC116345.2-201ENST00000512837 523 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
WNT3AP56704 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.3□□□□□ -0.12
WNT3AP56704 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.3□□□□□ -0.12
WNT3AP56704 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.3□□□□□ -0.12
WNT3AP56704 MEG3_2.1-201ENST00000611456 105 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 AC091544.8-201ENST00000619490 361 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 AC067931.2-201ENST00000623655 2003 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 AC105206.1-202ENST00000314927 2368 ntBASIC14.3□□□□□ -0.12
WNT3AP56704 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
WNT3AP56704 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.3□□□□□ -0.12
WNT3AP56704 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 MARK2P9-201ENST00000430958 1727 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 AC073548.1-201ENST00000624088 1882 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 ISCA2P1-201ENST00000425548 448 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.29□□□□□ -0.12
WNT3AP56704 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 AC099548.2-209ENST00000480264 625 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 HIST2H2BC-201ENST00000498492 580 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
WNT3AP56704 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.29□□□□□ -0.12
WNT3AP56704 AC005740.1-201ENST00000515639 522 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 ALG1L13P-202ENST00000519320 584 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.29□□□□□ -0.12
WNT3AP56704 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.29□□□□□ -0.12
WNT3AP56704 RN7SL774P-201ENST00000577467 290 ntBASIC14.29□□□□□ -0.12
WNT3AP56704 RN7SL455P-201ENST00000580629 282 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms