Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NEDD4P46934 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 RPL3P2-204ENST00000413027 1203 ntBASIC16.57■□□□□ 0.24
NEDD4P46934 AL512306.1-201ENST00000432698 848 ntBASIC16.57■□□□□ 0.24
NEDD4P46934 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.57■□□□□ 0.24
NEDD4P46934 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 ORAOV1P1-201ENST00000503108 395 ntBASIC16.57■□□□□ 0.24
NEDD4P46934 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.57■□□□□ 0.24
NEDD4P46934 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.57■□□□□ 0.24
NEDD4P46934 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
NEDD4P46934 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.57■□□□□ 0.24
NEDD4P46934 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.57■□□□□ 0.24
NEDD4P46934 AL031673.1-201ENST00000611460 466 ntBASIC16.57■□□□□ 0.24
NEDD4P46934 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 SALL4P6-201ENST00000429385 1691 ntBASIC16.57■□□□□ 0.24
NEDD4P46934 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NEDD4P46934 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.57■□□□□ 0.24
NEDD4P46934 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 AC004554.1-201ENST00000422830 1468 ntBASIC16.56■□□□□ 0.24
NEDD4P46934 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NEDD4P46934 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.56■□□□□ 0.24
NEDD4P46934 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.56■□□□□ 0.24
NEDD4P46934 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.56■□□□□ 0.24
NEDD4P46934 AC016629.1-201ENST00000596579 586 ntBASIC16.56■□□□□ 0.24
NEDD4P46934 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.56■□□□□ 0.24
NEDD4P46934 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.56■□□□□ 0.24
NEDD4P46934 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NEDD4P46934 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NEDD4P46934 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEDD4P46934 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NEDD4P46934 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NEDD4P46934 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 PYY2-201ENST00000315776 282 ntBASIC16.55■□□□□ 0.24
NEDD4P46934 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 LINC00265-2P-201ENST00000413372 782 ntBASIC16.55■□□□□ 0.24
NEDD4P46934 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.55■□□□□ 0.24
NEDD4P46934 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.55■□□□□ 0.24
NEDD4P46934 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.55■□□□□ 0.24
NEDD4P46934 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NEDD4P46934 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.55■□□□□ 0.24
NEDD4P46934 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEDD4P46934 AC079328.1-201ENST00000560358 952 ntBASIC16.55■□□□□ 0.24
NEDD4P46934 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.55■□□□□ 0.24
NEDD4P46934 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms