Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
CXCL5P42830 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
CXCL5P42830 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CXCL5P42830 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC9.65□□□□□ -0.86
CXCL5P42830 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
CXCL5P42830 AGAP10P-201ENST00000454844 2418 ntBASIC9.65□□□□□ -0.86
CXCL5P42830 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
CXCL5P42830 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
CXCL5P42830 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC9.65□□□□□ -0.87
CXCL5P42830 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC9.65□□□□□ -0.87
CXCL5P42830 MKRN5P-201ENST00000445263 1467 ntBASIC9.65□□□□□ -0.87
CXCL5P42830 AC024075.2-201ENST00000598112 1473 ntBASIC9.65□□□□□ -0.87
CXCL5P42830 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC9.65□□□□□ -0.87
CXCL5P42830 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC9.65□□□□□ -0.87
CXCL5P42830 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.87
CXCL5P42830 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC9.65□□□□□ -0.87
CXCL5P42830 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
CXCL5P42830 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
CXCL5P42830 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
CXCL5P42830 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 MIR1233-2-201ENST00000408138 82 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 MIR1233-1-201ENST00000408722 82 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 HLA-DRB6-201ENST00000411500 1235 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 GAS5-209ENST00000430245 723 ntTSL 3 BASIC9.64□□□□□ -0.87
CXCL5P42830 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
CXCL5P42830 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 AC123567.1-201ENST00000548294 1261 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
CXCL5P42830 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC9.64□□□□□ -0.87
CXCL5P42830 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC9.64□□□□□ -0.87
CXCL5P42830 AC009118.2-201ENST00000613275 655 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 AL022313.4-201ENST00000562756 2046 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 MARK2P9-201ENST00000430958 1727 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
CXCL5P42830 AC135782.3-201ENST00000562782 2105 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC9.64□□□□□ -0.87
CXCL5P42830 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
CXCL5P42830 AC102953.2-201ENST00000609755 3026 ntBASIC9.64□□□□□ -0.87
CXCL5P42830 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CXCL5P42830 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CXCL5P42830 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC9.63□□□□□ -0.87
CXCL5P42830 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
CXCL5P42830 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC9.63□□□□□ -0.87
CXCL5P42830 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.63□□□□□ -0.87
CXCL5P42830 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CXCL5P42830 POM121L14P-201ENST00000406100 1558 ntBASIC9.63□□□□□ -0.87
CXCL5P42830 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms