Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
MDH1P40925 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.23□□□□□ -0.13
MDH1P40925 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.23□□□□□ -0.13
MDH1P40925 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.23□□□□□ -0.13
MDH1P40925 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.23□□□□□ -0.13
MDH1P40925 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.23□□□□□ -0.13
MDH1P40925 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.23□□□□□ -0.13
MDH1P40925 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.23□□□□□ -0.13
MDH1P40925 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 AC120045.2-201ENST00000567334 178 ntBASIC14.23□□□□□ -0.13
MDH1P40925 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.23□□□□□ -0.13
MDH1P40925 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 BRI3BPP1-201ENST00000594224 787 ntBASIC14.23□□□□□ -0.13
MDH1P40925 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
MDH1P40925 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MDH1P40925 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MDH1P40925 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.22□□□□□ -0.13
MDH1P40925 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.22□□□□□ -0.13
MDH1P40925 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.22□□□□□ -0.13
MDH1P40925 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.22□□□□□ -0.13
MDH1P40925 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.22□□□□□ -0.13
MDH1P40925 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.22□□□□□ -0.13
MDH1P40925 MTDHP5-201ENST00000598980 586 ntBASIC14.22□□□□□ -0.13
MDH1P40925 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.22□□□□□ -0.13
MDH1P40925 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MDH1P40925 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms