Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLCN1P35523 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 KLF2P2-201ENST00000416807 1039 ntBASIC16.19■□□□□ 0.18
CLCN1P35523 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 AC114812.1-204ENST00000449669 728 ntBASIC16.19■□□□□ 0.18
CLCN1P35523 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.19■□□□□ 0.18
CLCN1P35523 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 AP001542.1-201ENST00000591314 200 ntBASIC16.19■□□□□ 0.18
CLCN1P35523 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.19■□□□□ 0.18
CLCN1P35523 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 MCU-204ENST00000536019 3224 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CLCN1P35523 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLCN1P35523 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLCN1P35523 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC16.19■□□□□ 0.18
CLCN1P35523 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLCN1P35523 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLCN1P35523 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CLCN1P35523 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN1P35523 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 DGCR5-201ENST00000399539 862 ntBASIC16.18■□□□□ 0.18
CLCN1P35523 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCN1P35523 ENPP7P5-201ENST00000541031 1031 ntBASIC16.18■□□□□ 0.18
CLCN1P35523 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN1P35523 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.18■□□□□ 0.18
CLCN1P35523 TP53TG3HP-202ENST00000569755 579 ntBASIC16.18■□□□□ 0.18
CLCN1P35523 AC140912.1-201ENST00000577171 1054 ntBASIC16.18■□□□□ 0.18
CLCN1P35523 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN1P35523 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.18■□□□□ 0.18
CLCN1P35523 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN1P35523 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 USO1-201ENST00000264904 4135 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN1P35523 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLCN1P35523 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
CLCN1P35523 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN1P35523 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLCN1P35523 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC16.18■□□□□ 0.18
CLCN1P35523 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLCN1P35523 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
CLCN1P35523 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLCN1P35523 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 AL354861.3-201ENST00000600140 2412 ntBASIC16.17■□□□□ 0.18
CLCN1P35523 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCN1P35523 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN1P35523 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms