Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 AC100827.2-201ENST00000563214 1194 ntBASIC15□□□□□ -0.01
CHRNA3P32297 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15□□□□□ -0.01
CHRNA3P32297 AL023803.2-201ENST00000620080 638 ntBASIC15□□□□□ -0.01
CHRNA3P32297 AC244452.3-201ENST00000636814 210 ntBASIC15□□□□□ -0.01
CHRNA3P32297 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 AGAP12P-201ENST00000585227 2359 ntBASIC15□□□□□ -0.01
CHRNA3P32297 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 AL133338.1-201ENST00000565695 1517 ntBASIC15□□□□□ -0.01
CHRNA3P32297 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRNA3P32297 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNA3P32297 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 E2F3P2-201ENST00000447755 1422 ntBASIC15□□□□□ -0.01
CHRNA3P32297 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA3P32297 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA3P32297 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHRNA3P32297 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNA3P32297 SERPINA13P-202ENST00000478994 924 ntBASIC14.99□□□□□ -0.01
CHRNA3P32297 AC091804.1-201ENST00000486888 567 ntBASIC14.99□□□□□ -0.01
CHRNA3P32297 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.99□□□□□ -0.01
CHRNA3P32297 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNA3P32297 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.99□□□□□ -0.01
CHRNA3P32297 MIR4783-201ENST00000580343 82 ntBASIC14.99□□□□□ -0.01
CHRNA3P32297 AC009955.4-201ENST00000597192 544 ntBASIC14.99□□□□□ -0.01
CHRNA3P32297 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.99□□□□□ -0.01
CHRNA3P32297 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 AL162426.1-201ENST00000624141 743 ntBASIC14.99□□□□□ -0.01
CHRNA3P32297 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CHRNA3P32297 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHRNA3P32297 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA3P32297 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA3P32297 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA3P32297 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA3P32297 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA3P32297 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms