Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.93■□□□□ 0.46
RXRBP28702 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RXRBP28702 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RXRBP28702 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.92■□□□□ 0.46
RXRBP28702 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RXRBP28702 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 KRT8P24-201ENST00000560290 1559 ntBASIC17.92■□□□□ 0.46
RXRBP28702 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RXRBP28702 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC17.92■□□□□ 0.46
RXRBP28702 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 RPS15P5-201ENST00000449885 432 ntBASIC17.92■□□□□ 0.46
RXRBP28702 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC17.92■□□□□ 0.46
RXRBP28702 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC17.92■□□□□ 0.46
RXRBP28702 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
RXRBP28702 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RXRBP28702 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RXRBP28702 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RXRBP28702 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC17.92■□□□□ 0.46
RXRBP28702 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RXRBP28702 AC245140.2-201ENST00000624054 1939 ntBASIC17.92■□□□□ 0.46
RXRBP28702 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
RXRBP28702 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC17.91■□□□□ 0.46
RXRBP28702 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RXRBP28702 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.91■□□□□ 0.46
RXRBP28702 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RXRBP28702 SSR4P1-201ENST00000415143 412 ntBASIC17.91■□□□□ 0.46
RXRBP28702 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC17.91■□□□□ 0.46
RXRBP28702 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC17.91■□□□□ 0.46
RXRBP28702 RN7SL789P-201ENST00000478944 293 ntBASIC17.91■□□□□ 0.46
RXRBP28702 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC17.91■□□□□ 0.46
RXRBP28702 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC17.91■□□□□ 0.46
RXRBP28702 AC092368.1-201ENST00000568014 733 ntBASIC17.91■□□□□ 0.46
RXRBP28702 AC245884.8-201ENST00000599382 880 ntBASIC17.91■□□□□ 0.46
RXRBP28702 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC17.91■□□□□ 0.46
RXRBP28702 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RXRBP28702 MIR6749-201ENST00000617008 69 ntBASIC17.91■□□□□ 0.46
RXRBP28702 AC138907.9-201ENST00000623747 986 ntBASIC17.91■□□□□ 0.46
RXRBP28702 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RXRBP28702 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.91■□□□□ 0.46
RXRBP28702 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RXRBP28702 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.91■□□□□ 0.46
RXRBP28702 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RXRBP28702 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.9■□□□□ 0.46
RXRBP28702 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
RXRBP28702 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RXRBP28702 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC17.9■□□□□ 0.46
RXRBP28702 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC17.9■□□□□ 0.46
RXRBP28702 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC17.9■□□□□ 0.46
RXRBP28702 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 IGHV3OR16-11-201ENST00000565524 349 ntBASIC17.9■□□□□ 0.46
RXRBP28702 ALOX12P1-201ENST00000579299 1229 ntBASIC17.9■□□□□ 0.46
RXRBP28702 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC17.9■□□□□ 0.46
RXRBP28702 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC17.9■□□□□ 0.46
RXRBP28702 RN7SL341P-201ENST00000613745 298 ntBASIC17.9■□□□□ 0.46
RXRBP28702 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RXRBP28702 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.9■□□□□ 0.46
RXRBP28702 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RXRBP28702 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
RXRBP28702 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms