Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCND1P24385 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.37□□□□□ -0.11
CCND1P24385 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCND1P24385 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCND1P24385 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCND1P24385 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.37□□□□□ -0.11
CCND1P24385 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CCND1P24385 AC015819.3-201ENST00000624305 2674 ntBASIC14.37□□□□□ -0.11
CCND1P24385 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCND1P24385 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 AL157996.1-201ENST00000624684 2299 ntBASIC14.36□□□□□ -0.11
CCND1P24385 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCND1P24385 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 U91328.1-201ENST00000437528 223 ntBASIC14.36□□□□□ -0.11
CCND1P24385 AL355994.2-201ENST00000447882 704 ntBASIC14.36□□□□□ -0.11
CCND1P24385 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.36□□□□□ -0.11
CCND1P24385 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.36□□□□□ -0.11
CCND1P24385 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.36□□□□□ -0.11
CCND1P24385 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 AL512343.1-201ENST00000605837 169 ntBASIC14.36□□□□□ -0.11
CCND1P24385 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.36□□□□□ -0.11
CCND1P24385 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCND1P24385 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CCND1P24385 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCND1P24385 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
CCND1P24385 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.35□□□□□ -0.11
CCND1P24385 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
CCND1P24385 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCND1P24385 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.35□□□□□ -0.11
CCND1P24385 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.35□□□□□ -0.11
CCND1P24385 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.35□□□□□ -0.11
CCND1P24385 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.35□□□□□ -0.11
CCND1P24385 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 MIR1202-201ENST00000408529 83 ntBASIC14.35□□□□□ -0.11
CCND1P24385 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCND1P24385 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.35□□□□□ -0.11
CCND1P24385 AC112492.5-201ENST00000421897 457 ntBASIC14.35□□□□□ -0.11
CCND1P24385 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.35□□□□□ -0.11
CCND1P24385 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 CTBP2P5-201ENST00000454986 1264 ntBASIC14.35□□□□□ -0.11
CCND1P24385 CROCCP4-201ENST00000457096 498 ntBASIC14.35□□□□□ -0.11
CCND1P24385 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.35□□□□□ -0.11
CCND1P24385 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 AC104989.1-201ENST00000519711 778 ntBASIC14.35□□□□□ -0.11
CCND1P24385 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.35□□□□□ -0.11
CCND1P24385 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.35□□□□□ -0.11
CCND1P24385 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCND1P24385 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.35□□□□□ -0.11
CCND1P24385 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CCND1P24385 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms