Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NR4A1P22736 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 AP003969.2-201ENST00000623739 2275 ntBASIC13.28□□□□□ -0.28
NR4A1P22736 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
NR4A1P22736 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
NR4A1P22736 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NR4A1P22736 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 NUS1P3-201ENST00000423502 862 ntBASIC13.28□□□□□ -0.28
NR4A1P22736 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A1P22736 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 AC093433.1-201ENST00000458048 571 ntBASIC13.28□□□□□ -0.28
NR4A1P22736 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A1P22736 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.28□□□□□ -0.28
NR4A1P22736 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 AC106886.1-201ENST00000568660 600 ntBASIC13.28□□□□□ -0.28
NR4A1P22736 AC008735.3-201ENST00000596646 500 ntBASIC13.28□□□□□ -0.28
NR4A1P22736 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.28□□□□□ -0.28
NR4A1P22736 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NR4A1P22736 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.28□□□□□ -0.28
NR4A1P22736 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.28□□□□□ -0.28
NR4A1P22736 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NR4A1P22736 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.28□□□□□ -0.28
NR4A1P22736 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
NR4A1P22736 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A1P22736 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A1P22736 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NR4A1P22736 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NR4A1P22736 AL022323.5-201ENST00000624101 2059 ntBASIC13.27□□□□□ -0.28
NR4A1P22736 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NR4A1P22736 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.27□□□□□ -0.28
NR4A1P22736 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NR4A1P22736 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 BAATP1-201ENST00000412284 1225 ntBASIC13.27□□□□□ -0.29
NR4A1P22736 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.27□□□□□ -0.29
NR4A1P22736 SLC25A47P1-201ENST00000531577 414 ntBASIC13.27□□□□□ -0.29
NR4A1P22736 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.27□□□□□ -0.29
NR4A1P22736 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 BTNL10-201ENST00000595971 695 ntBASIC13.27□□□□□ -0.29
NR4A1P22736 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.27□□□□□ -0.29
NR4A1P22736 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NR4A1P22736 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NR4A1P22736 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms