Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 NUDT4P2-201ENST00000578341 546 ntBASIC15.66■□□□□ 0.1
ATP4AP20648 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.66■□□□□ 0.1
ATP4AP20648 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP4AP20648 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ATP4AP20648 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ATP4AP20648 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP4AP20648 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.66■□□□□ 0.1
ATP4AP20648 AL139158.3-201ENST00000641212 1562 ntBASIC15.66■□□□□ 0.1
ATP4AP20648 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.66■□□□□ 0.1
ATP4AP20648 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATP4AP20648 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 AC090502.4-201ENST00000551714 1386 ntBASIC15.65■□□□□ 0.1
ATP4AP20648 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP4AP20648 TCAM1P-207ENST00000485295 1537 ntBASIC15.65■□□□□ 0.1
ATP4AP20648 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATP4AP20648 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP4AP20648 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP4AP20648 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP4AP20648 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATP4AP20648 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP4AP20648 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP4AP20648 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.65■□□□□ 0.1
ATP4AP20648 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.65■□□□□ 0.1
ATP4AP20648 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.65■□□□□ 0.1
ATP4AP20648 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP4AP20648 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.65■□□□□ 0.1
ATP4AP20648 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.65■□□□□ 0.1
ATP4AP20648 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP4AP20648 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.65■□□□□ 0.1
ATP4AP20648 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.65■□□□□ 0.1
ATP4AP20648 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.65■□□□□ 0.1
ATP4AP20648 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
ATP4AP20648 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATP4AP20648 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ATP4AP20648 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.64■□□□□ 0.09
ATP4AP20648 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 CR383656.2-201ENST00000548656 2254 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 AC015909.5-201ENST00000624336 2266 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ATP4AP20648 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.64■□□□□ 0.09
ATP4AP20648 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.64■□□□□ 0.09
ATP4AP20648 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 RNVU1-8-201ENST00000364272 125 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ATP4AP20648 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
ATP4AP20648 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.64■□□□□ 0.09
ATP4AP20648 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 STK24P1-201ENST00000455035 1291 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 AC018463.1-201ENST00000456674 917 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ATP4AP20648 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATP4AP20648 KRT8P2-201ENST00000556193 944 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 RN7SL357P-201ENST00000581065 298 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 AC140113.1-201ENST00000603467 169 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 AP000322.3-201ENST00000608665 388 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 AP001065.2-201ENST00000617205 644 ntBASIC15.64■□□□□ 0.09
ATP4AP20648 AC105137.3-201ENST00000617588 984 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms