Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.45□□□□□ -0.42
SFTPBP07988 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 NUTM2HP-201ENST00000442076 2498 ntBASIC12.45□□□□□ -0.42
SFTPBP07988 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SFTPBP07988 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SFTPBP07988 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SFTPBP07988 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 KRT8P28-201ENST00000433288 1390 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 AHCYP2-201ENST00000430630 1300 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 AC006001.1-201ENST00000325130 474 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SFTPBP07988 MIR1202-201ENST00000408529 83 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
SFTPBP07988 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 AC092658.1-201ENST00000505836 891 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 RNA5SP412-201ENST00000516234 123 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.44□□□□□ -0.42
SFTPBP07988 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.44□□□□□ -0.42
SFTPBP07988 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.44□□□□□ -0.42
SFTPBP07988 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SFTPBP07988 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.44□□□□□ -0.42
SFTPBP07988 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.44□□□□□ -0.42
SFTPBP07988 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 OR10B1P-201ENST00000601666 907 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SFTPBP07988 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SFTPBP07988 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.44□□□□□ -0.42
SFTPBP07988 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SFTPBP07988 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.44□□□□□ -0.42
SFTPBP07988 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SFTPBP07988 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SFTPBP07988 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SFTPBP07988 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.43□□□□□ -0.42
SFTPBP07988 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 FAM90A12P-201ENST00000519497 2375 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 FAM90A24P-201ENST00000520792 2369 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 AL354989.2-201ENST00000435838 1540 ntBASIC12.43□□□□□ -0.42
SFTPBP07988 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SFTPBP07988 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SFTPBP07988 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms