Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.43■□□□□ 0.06
VTNP04004 AC108734.2-201ENST00000420887 1069 ntBASIC15.43■□□□□ 0.06
VTNP04004 AC097065.1-201ENST00000425737 517 ntBASIC15.43■□□□□ 0.06
VTNP04004 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.43■□□□□ 0.06
VTNP04004 RPL35P9-201ENST00000446059 350 ntBASIC15.43■□□□□ 0.06
VTNP04004 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.43■□□□□ 0.06
VTNP04004 PRSS3P1-201ENST00000503996 742 ntBASIC15.43■□□□□ 0.06
VTNP04004 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.43■□□□□ 0.06
VTNP04004 VENTXP3-201ENST00000546480 773 ntBASIC15.43■□□□□ 0.06
VTNP04004 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.43■□□□□ 0.06
VTNP04004 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.43■□□□□ 0.06
VTNP04004 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.43■□□□□ 0.06
VTNP04004 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.43■□□□□ 0.06
VTNP04004 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.43■□□□□ 0.06
VTNP04004 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.43■□□□□ 0.06
VTNP04004 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.43■□□□□ 0.06
VTNP04004 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VTNP04004 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.43■□□□□ 0.06
VTNP04004 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.42■□□□□ 0.06
VTNP04004 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 ALG1L6P-201ENST00000515248 758 ntBASIC15.42■□□□□ 0.06
VTNP04004 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
VTNP04004 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 AL009176.1-201ENST00000607876 650 ntBASIC15.42■□□□□ 0.06
VTNP04004 AL118522.1-201ENST00000611368 560 ntBASIC15.42■□□□□ 0.06
VTNP04004 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
VTNP04004 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 AC152010.1-201ENST00000415779 2006 ntBASIC15.42■□□□□ 0.06
VTNP04004 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 HSPA7-201ENST00000445535 1927 ntBASIC15.42■□□□□ 0.06
VTNP04004 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 MST1P2-201ENST00000457982 2291 ntBASIC15.42■□□□□ 0.06
VTNP04004 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VTNP04004 AC016397.2-201ENST00000624848 1985 ntBASIC15.42■□□□□ 0.06
VTNP04004 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VTNP04004 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
VTNP04004 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
VTNP04004 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.41■□□□□ 0.06
VTNP04004 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
VTNP04004 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 AL157996.1-201ENST00000624684 2299 ntBASIC15.41■□□□□ 0.06
VTNP04004 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.41■□□□□ 0.06
VTNP04004 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.41■□□□□ 0.06
VTNP04004 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VTNP04004 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.41■□□□□ 0.06
VTNP04004 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VTNP04004 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms