Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 FAM86HP-204ENST00000513466 959 ntBASIC11.44□□□□□ -0.58
SRRM4A7MD48 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SRRM4A7MD48 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SRRM4A7MD48 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AC104073.2-201ENST00000453737 312 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 IGHV3-71-201ENST00000523324 359 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 AL583810.1-201ENST00000553344 1045 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 SNORD3B-2-202ENST00000571722 791 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AC004923.1-202ENST00000642106 209 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 AL031595.1-201ENST00000623969 4709 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SRRM4A7MD48 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms