Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR4326-201ENST00000582203 59 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AC026271.1-201ENST00000447794 1348 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AL021407.3-201ENST00000407522 486 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AL356583.3-201ENST00000412354 417 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 RPL18P1-201ENST00000497218 552 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 CDC20P1-201ENST00000488829 1500 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 ALOX12P1-201ENST00000579299 1229 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC12.76□□□□□ -0.37
CHD8Q9HCK8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 IGHV3-60-201ENST00000521678 354 ntBASIC12.75□□□□□ -0.37
CHD8Q9HCK8 AKR1B1P3-201ENST00000525311 588 ntBASIC12.75□□□□□ -0.37
CHD8Q9HCK8 PTS-204ENST00000525803 625 ntTSL 3 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 U62317.4-201ENST00000609758 448 ntBASIC12.75□□□□□ -0.37
CHD8Q9HCK8 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC12.75□□□□□ -0.37
CHD8Q9HCK8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 RPSAP5-201ENST00000485258 884 ntBASIC12.75□□□□□ -0.37
CHD8Q9HCK8 RPL29P2-202ENST00000498671 657 ntBASIC12.75□□□□□ -0.37
CHD8Q9HCK8 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC12.75□□□□□ -0.37
CHD8Q9HCK8 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms